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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891753.1_cds_XP_016446600.1_41440
CDS Infomation

[gene=LOC107771684] [db_xref=GeneID:107771684] [protein=probable pectinesterase 8] [protein_id=XP_016446600.1] [location=join(7776..8101,8203..8374,8799..9005,9634..9951)] [gbkey=CDS]
Sequence

ATGAATCCTAAAGCCATAATTTTCCCACTTTTCATAGCAATAACTGCTGCTTTTGTATCA
ACAAATTTCACGTACTTCAACTGCATTCTTAATGTTAATCGACGCCATCACGATCATCAC
CATCACTCCGATGGTGATAAGGCAAAAATATCAATATGTGACAAATTTTCGCCGAATTTT
CCCACTATAGACACTAATACAACGTCCATTCTATGCGTTGATCATAATGGCTGTTGTAAT
TTCACTACAGTGCAAGCTGCAGTTGATGCAGTTGGAAATTTTAGTGCGAAAAGAAGCTTA
ATATGGATAAACAATGGCATTTATTTTGAAAAAGTAATTATTCCAAAAACAAAACCTAAC
ATCACATTTCAAGGGCAAGGGTATACCACAACAGCTATTGTATGGAATGACACAGCCAAT
TCTGCAAATGGCACATTTTACAGTGGATCTGTCCAAATTTTCTCTACCAACTTTATTGCC
AAGAATATAAGTTTCATGAATGTAGCTCCAATGCCGGGGCCAGGGGCAGTAGGAGCGCAA
GCAGTGGCAATTAGGATAGCAGGAGATGAAGCTGCTTTCTGGGGTTGTGGATTTTTCGGA
GCTCAGGATACTCTTCATGATGATAGGGGTCGCCATTATTTCAAAGATTGTTATATTCAG
GGTTCTATCGACTTTATTTTTGGCAATGGCAAATCATTGTACGAGAACTGCCAGTTGATA
TCAATAGCAAGTCCAGTAGCAGCAGGAGTGAAGTCGATCAATGGCGCTGTGACAGCACAC
GGCAGAGCAACCAAAGACGAAAACAGCGGCTTTGCATTCGTGAACTGCACTTTGGGAGGA
ACTGGTAGGATTTGGTTGGGGCGTGCATGGAGGCCTTACTCCACTGTCGTCTTTGCTAAC
ACTTACATGACTGATATCGTCGCTCCTGAGGGCTGGAATGACTTTAACGACCCTTCAAGA
GATCAGTTAAGTCGTTTCATTTCATCTATAAGTTCAAACTATGATAATAAAAAAAAAATA
TGA

Peptide Sequence

PEP ID

XP_016446600.1
PEP Infomation

PREDICTED: probable pectinesterase 8 [Nicotiana tabacum]
Sequence

MNPKAIIFPLFIAITAAFVSTNFTYFNCILNVNRRHHDHHHHSDGDKAKISICDKFSPNF
PTIDTNTTSILCVDHNGCCNFTTVQAAVDAVGNFSAKRSLIWINNGIYFEKVIIPKTKPN
ITFQGQGYTTTAIVWNDTANSANGTFYSGSVQIFSTNFIAKNISFMNVAPMPGPGAVGAQ
AVAIRIAGDEAAFWGCGFFGAQDTLHDDRGRHYFKDCYIQGSIDFIFGNGKSLYENCQLI
SIASPVAAGVKSINGAVTAHGRATKDENSGFAFVNCTLGGTGRIWLGRAWRPYSTVVFAN
TYMTDIVAPEGWNDFNDPSRDQLSRFISSISSNYDNKKKI

Transcript Sequence

Gene sequence data has not been registered.